FASTAQuery Class Reference

#include <fasta_query.h>

Public Member Functions
int	setFilepath (std::string fasta_filepath)
std::string	getFilepath ()
std::string	query (std::string chr, int pos_start, int pos_end)
std::string	getContigHeader ()

Private Attributes
std::string	fasta_filepath
std::map< std::string, std::string >	chr_to_seq

Member Function Documentation

getContigHeader()

std::string FASTAQuery::getContigHeader

(

)

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getFilepath()

std::string FASTAQuery::getFilepath

(

)

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query()

std::string FASTAQuery::query	(	std::string	chr,
		int	pos_start,
		int	pos_end
	)

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setFilepath()

int FASTAQuery::setFilepath

(

std::string

fasta_filepath

)

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Member Data Documentation

chr_to_seq

std::map<std::string, std::string> FASTAQuery::chr_to_seq

private

fasta_filepath

std::string FASTAQuery::fasta_filepath

private

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The documentation for this class was generated from the following files:

• include/fasta_query.h
• src/fasta_query.cpp