SVCaller Class Reference

#include <sv_caller.h>

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Public Member Functions
	SVCaller ()=default
void	run (const InputData &input_data)
void	findOverlaps (const std::unique_ptr< IntervalNode > &root, const PrimaryAlignment &query, std::vector< std::string > &result)
void	insert (std::unique_ptr< IntervalNode > &root, const PrimaryAlignment &region, std::string qname)

Constructor & Destructor Documentation

SVCaller()

SVCaller::SVCaller ( )

default

Member Function Documentation

findOverlaps()

void SVCaller::findOverlaps	(	const std::unique_ptr< IntervalNode > &	root,
		const PrimaryAlignment &	query,
		std::vector< std::string > &	result
	)

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insert()

void SVCaller::insert	(	std::unique_ptr< IntervalNode > &	root,
		const PrimaryAlignment &	region,
		std::string	qname
	)

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run()

void SVCaller::run

(

const InputData &

input_data

)

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The documentation for this class was generated from the following files:

• include/sv_caller.h
• src/sv_caller.cpp