types.h File Reference

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Typedefs
using	SNPLocation = std::pair< std::string, int >
using	SNPToCNVMap = std::map< SNPLocation, int >
using	SVCandidate = std::tuple< std::string, int, int, std::string >
using	SVInfo = std::pair< int, int >
using	SVDepthMap = std::map< SVCandidate, SVInfo >
using	AlignmentData = std::tuple< std::string, int, int, int >
using	AlignmentVector = std::vector< AlignmentData >
using	QueryMap = std::map< std::string, AlignmentVector >

Typedef Documentation

AlignmentData

using AlignmentData = std::tuple<std::string, int, int, int>

AlignmentVector

using AlignmentVector = std::vector<AlignmentData>

QueryMap

using QueryMap = std::map<std::string, AlignmentVector>

SNPLocation

using SNPLocation = std::pair<std::string, int>

SNPToCNVMap

using SNPToCNVMap = std::map<SNPLocation, int>

SVCandidate

using SVCandidate = std::tuple<std::string, int, int, std::string>

SVDepthMap

using SVDepthMap = std::map<SVCandidate, SVInfo>

SVInfo

using SVInfo = std::pair<int, int>