#include <sv_object.h>

Collaboration diagram for SVCall:

Public Member Functions
bool	operator< (const SVCall &other) const

	SVCall ()=default

	SVCall (uint32_t start, uint32_t end, SVType sv_type, const std::string &alt_allele, SVEvidenceFlags aln_type, Genotype genotype, double hmm_likelihood, int cn_state, int aln_offset, int cluster_size)

Public Attributes
uint32_t	start = 0

uint32_t	end = 0

SVType	sv_type = SVType::UNKNOWN

std::string	alt_allele = "."

SVEvidenceFlags	aln_type

Genotype	genotype = Genotype::UNKNOWN

double	hmm_likelihood = 0.0

int	cn_state = 0

int	aln_offset = 0

int	cluster_size = 0

Constructor & Destructor Documentation

◆ SVCall() [1/2]

SVCall::SVCall ( )

default

◆ SVCall() [2/2]

SVCall::SVCall	(	uint32_t	start,
		uint32_t	end,
		SVType	sv_type,
		const std::string &	alt_allele,
		SVEvidenceFlags	aln_type,
		Genotype	genotype,
		double	hmm_likelihood,
		int	cn_state,
		int	aln_offset,
		int	cluster_size
	)

inline

Member Function Documentation

◆ operator<()

bool SVCall::operator< ( const SVCall & other ) const

Member Data Documentation

◆ aln_offset

int SVCall::aln_offset = 0

◆ aln_type

SVEvidenceFlags SVCall::aln_type

◆ alt_allele

std::string SVCall::alt_allele = "."

◆ cluster_size

int SVCall::cluster_size = 0

◆ cn_state

int SVCall::cn_state = 0

◆ end

uint32_t SVCall::end = 0

◆ genotype

Genotype SVCall::genotype = Genotype::UNKNOWN

◆ hmm_likelihood

double SVCall::hmm_likelihood = 0.0

◆ start

uint32_t SVCall::start = 0

◆ sv_type

SVType SVCall::sv_type = SVType::UNKNOWN

The documentation for this struct was generated from the following files:

include/sv_object.h
src/sv_object.cpp

Public Member Functions

Public Attributes