ContextSV 0.0.1
Integrative SV calling.
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cnv_data.h
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1#ifndef CNV_DATA_H
2#define CNV_DATA_H
3
4#include "types.h"
5
7#include <string>
9
10
11class CNVData {
12 private:
14
15 public:
16 void addCNVCall(std::string chr, int snp_pos, int cnv_type);
17 int getMostCommonCNV(std::string chr, int start, int end);
18};
19
20#endif // CNV_DATA_H
Definition cnv_data.h:11
int getMostCommonCNV(std::string chr, int start, int end)
Definition cnv_data.cpp:14
SNPToCNVMap cnv_calls
Definition cnv_data.h:13
void addCNVCall(std::string chr, int snp_pos, int cnv_type)
Definition cnv_data.cpp:7
std::map< SNPLocation, int > SNPToCNVMap
Definition types.h:15