|
ContextSV v1.0.0
|
This is the complete list of members for ReferenceGenome, including all inherited members.
| compare(const std::string &chr, uint32_t pos_start, uint32_t pos_end, const std::string &compare_seq, float match_threshold) const | ReferenceGenome | |
| getChromosomeLength(std::string chr) const | ReferenceGenome | |
| getChromosomes() const | ReferenceGenome | |
| getContigHeader() const | ReferenceGenome | |
| getFilepath() const | ReferenceGenome | |
| query(const std::string &chr, uint32_t pos_start, uint32_t pos_end) const | ReferenceGenome | |
| ReferenceGenome(std::shared_mutex &shared_mutex) | ReferenceGenome | inline |
| setFilepath(std::string fasta_filepath) | ReferenceGenome |